Joined March 2012
·

Rob

Big Data Engineer at Monsanto
·
St.Louis, MO USA
·
·
·

Posted to Convert 23andme raw data to VCF over 1 year ago

I have recently pushed a fix for the missing reference position issues. I have also added a means for improving the reference included with the project. When you run your data, if any sites in your data are not included in the reference, the chromosome and position will be noted in a file named "sitesnotin_reference.txt". There is no personally identifying information in this, just genomic positions. If you'd like me to update the included reference to add the reference bases for these sites, just get that list to me, and I will update the included reference.

Achievements
214 Karma
7,329 Total ProTip Views